An example result looks like this:

*********************************
A1: >AT1G01010.1
A2: >AT2G16430
Kmer Ranges:
Lower: 74 Upper: 81
Lower: 1243 Upper: 1250
Normalized MiRNA Score: 1.84211
Current Window Size: 19
MiRNA Bounds: 64 83:1241 1260
A1 Region (5' - 3') : AGCGAGAGAGATCGACGGC
Quality             : ||||||:||||||||||||
A2 Region (3' - 5') : TCGCTCCCTCTAGCTGCTG
Precursor Score: 1.36842
Aligned 1: AGCGACTGAGAACGGCGGT
Quality  : ||||| :||||:|||||||
Aligned 2: TCGCTCCCTCTAGCTGCTG
PRECURSOR: AGACGCAGTCGTCGATCTCCCTCGCTTCCACGCAGCGTCCGACTCCGTCCAAAGTTCTTGAAGGAGCGACTGAGAACGGCGGTGATGTGG
STRUCTURE: ...((((.((((((.((((..(((((((((.(.(((....(((...)))....)))).))..)))))))..)))).))))))...)))).
MFE: -29.7999992370605
Precursor Length: 90
Transcript Length: 1486
Comment:   43   ,Changes: 7

where

A1: (The name of the targeted transcript)
A2: (The name of the intergenic region the precursor originagted)
Kmer Ranges:
Lower: (Lower transcript index for 7mer) Upper: (Upper transcript index for 7mer)
Lower: (Lower intergenic index for 7mer) Upper: (Upper intergenic index for 7mer)
Normalized MiRNA Score: (Score of miRNA/Target binding)
Current Window Size: (Predicted length of miRNA)
MiRNA Bounds: (Bounds of targeted region of the transcript):(Bounds of miRNA in intergenic region)
A1 Region (5' - 3') : (Region of targeted transcript)
Quality             : (Quality of the potential RNA duplex)
A2 Region (3' - 5') : (Predicted miRNA)
Precursor Score: (Score of the upstream/downstream complement to the miRNA)
Aligned 1: (predicted miRNA complement using overlap matches, and not RNAFold)
Quality  : (Quality of miRNA binding to its complement)
Aligned 2: (predicted miRNA)
PRECURSOR: (Predicted precursor or miRNA gene)
STRUCTURE: (RNA secondary structure predicted by RNAFold)
MFE: (Minimum free energy predicted by RNAFold)
Precursor Length: (Length of the precursor)
Transcript Length: (Length of the transcript in A1)
Comment: (Various comments about this hit)

Note: ALL indices are base 0 (The first letter is at index 0).